Contact Us

How to Study Gene Regulatory Networks in Embryonic Development

Tracking cell lineages in tissue morphogenesis with 3D multi-view light sheet microscopy

Developing embryos of different species at different stages during the elongation of their posterior body axis, from left to right in developmental time. The labelled regions in red depict a region of undifferentiated cells called the tailbud, with the corresponding region generated from that tissue shaded in grey. Upper row: lamprey; middle row: catshark; bottom row, zebrafish. This figure has been adapted from the following publication: Steventon, B., Duarte, F., Lagadec, R., Mazan, S., Nicolas, J.-F., & Hirsinger, E. (2016). Species tailoured contribution of volumetric growth and tissue convergence to posterior body elongation in vertebrates. Development, 2016. 143(10):1732-41 Developing_embryos_during_elongation_of_posterior_body_axis_teaser.jpg

Join Dr. Andrea Boni by attending this on-demand webinar to explore how light-sheet microscopy revolutionizes developmental biology. This advanced imaging technique allows for high-speed, volumetric live imaging of 3D samples with minimal phototoxicity. Learn through user examples how light-sheet microscopy is enhancing our understanding of intestinal and brain organoid development and dive into the technology behind the Viventis Deep microscope from Leica Microsystems and its application in long-term imaging.

In this webinar, you will learn:

  • How to use multi-view light sheet microscopy to track cell lineages in vivo during embryonic development
  • Ways to use cell tracking data to form hypotheses on gene regulatory networks influencing pattern emergence during morphogenesis
  • About the unique versatility of the Viventis Deep microscope in studying the development of various species and embryo models

Cutting-Edge Light-Sheet Microscopy for Live 3D Imaging

A major question in developmental biology is understanding how cellular fate decisions are regulated precisely in space and time. Techniques like live 3D time-lapse microscopy enable the tracking of cell-fate-decision events and cellular rearrangements over time. The results are shifting our understanding of pattern formation in development from static models towards dynamic systems grounded in the principles of statistical mechanics.

In this webinar recording, Dr. Andrea Boni delves into how light-sheet microscopy has become the technique of choice for volumetric live-imaging of 3D samples. Light-sheet microscopy stands out due to its high-speed capabilities and minimal phototoxicity, making it ideal for long-term studies of live samples. Thus, it allows researchers to capture intricate details of developmental processes, including cellular dynamics and gene expression changes.

Prof. Ben Stephenson from the University of Cambridge discusses his research on embryonic development, focusing on how the body axis is established and the dynamics of cell behaviors during tissue morphogenesis. He emphasizes the importance of understanding both gene expression networks and the mechanical aspects of tissue formation.

Prof. Stephenson presents data from studies on zebrafish gastrulation, highlighting the use of multi-view light-sheet microscopy to track the fate of cells as they undergo specification and morphogenesis. He explains how these advanced imaging techniques have enabled researchers to create detailed fate maps with single-cell resolution, revealing how cells in early development contribute to different tissue types.

Then Dr. Boni introduces the Viventis Deep microscope from Leica Microsystems. This state-of-the-art instrument features dual-view illumination and detection in an open-top configuration, allowing for easy sample mounting and long-term imaging. He illustrates how this setup facilitates the study of various biological processes, including the development of intestinal and brain organoids. The dual-view system enhances image quality by reducing light scattering and improving penetration depth, making it possible to capture high-resolution images from large multicellular systems.

Dr. Boni further discusses the practical aspects of using light-sheet microscopy for long-term live imaging. The advantages of the open-top sample holder, which allows for easy pipetting and medium exchange, enables researchers to conduct multi-sample imaging experiments. The system's advanced software provides flexibility for running complex imaging protocols, including multi-position imaging and automated alignment of the light sheet.

The session concludes with a Q&A segment, where the speakers address various technical questions from the audience, like computational modeling of cell volumes, the use of ratio-metric probes for real-time imaging, and the compatibility of light-sheet microscopy with different sample preparation methods.

By enabling detailed observation of cellular dynamics and gene-expression changes, light-sheet microscopy can help scientists unravel the complex regulatory networks that govern development.

Scroll to top